Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 AL136172.1-201ENST00000598590 1394 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 AC083964.2-201ENST00000623988 2396 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CLDN12P56749 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.85□□□□□ -0.35
CLDN12P56749 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
CLDN12P56749 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 DRD5P1-201ENST00000456605 1438 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CLDN12P56749 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 AC072061.1-201ENST00000569710 2234 ntBASIC12.85□□□□□ -0.35
CLDN12P56749 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN12P56749 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN12P56749 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDN12P56749 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 SALL4P5-201ENST00000419001 1760 ntBASIC12.84□□□□□ -0.35
CLDN12P56749 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 AC068760.1-201ENST00000493579 1953 ntBASIC12.84□□□□□ -0.35
CLDN12P56749 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN12P56749 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN12P56749 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 AC069262.1-201ENST00000539058 672 ntBASIC12.84□□□□□ -0.35
CLDN12P56749 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.84□□□□□ -0.35
CLDN12P56749 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.84□□□□□ -0.35
CLDN12P56749 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CLDN12P56749 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLDN12P56749 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms