Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.86□□□□□ -0.03
WNT3AP56704 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.86□□□□□ -0.03
WNT3AP56704 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 HLA-V-201ENST00000429037 534 ntBASIC14.86□□□□□ -0.03
WNT3AP56704 CSF2RBP1-201ENST00000447905 391 ntBASIC14.86□□□□□ -0.03
WNT3AP56704 AL035414.1-201ENST00000451327 857 ntBASIC14.86□□□□□ -0.03
WNT3AP56704 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.86□□□□□ -0.03
WNT3AP56704 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.86□□□□□ -0.03
WNT3AP56704 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3AP56704 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.86□□□□□ -0.03
WNT3AP56704 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3AP56704 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3AP56704 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3AP56704 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
WNT3AP56704 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 AC009093.10-201ENST00000641956 1442 ntBASIC14.85□□□□□ -0.03
WNT3AP56704 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
WNT3AP56704 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 MIR326-201ENST00000362220 95 ntBASIC14.85□□□□□ -0.03
WNT3AP56704 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.85□□□□□ -0.03
WNT3AP56704 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.85□□□□□ -0.03
WNT3AP56704 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 AC119751.2-201ENST00000504529 210 ntBASIC14.85□□□□□ -0.03
WNT3AP56704 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.85□□□□□ -0.03
WNT3AP56704 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3AP56704 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3AP56704 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 AL023775.1-201ENST00000454907 1746 ntBASIC14.85□□□□□ -0.03
WNT3AP56704 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
WNT3AP56704 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3AP56704 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
WNT3AP56704 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3AP56704 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
WNT3AP56704 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms