Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 LINC00554-201ENST00000564841 3011 ntBASIC10.77□□□□□ -0.68
APOC4P55056 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
APOC4P55056 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.77□□□□□ -0.68
APOC4P55056 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
APOC4P55056 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
APOC4P55056 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
APOC4P55056 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.77□□□□□ -0.69
APOC4P55056 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 AC016700.1-201ENST00000429424 312 ntBASIC10.77□□□□□ -0.69
APOC4P55056 RN7SL11P-201ENST00000471305 293 ntBASIC10.77□□□□□ -0.69
APOC4P55056 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 AC125604.1-201ENST00000496255 707 ntBASIC10.77□□□□□ -0.69
APOC4P55056 ZNF767P-206ENST00000513792 565 ntBASIC10.77□□□□□ -0.69
APOC4P55056 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 DRG2-220ENST00000583355 891 ntTSL 3 BASIC10.77□□□□□ -0.69
APOC4P55056 AC005962.1-201ENST00000584100 773 ntBASIC10.77□□□□□ -0.69
APOC4P55056 AL132994.2-201ENST00000603120 687 ntBASIC10.77□□□□□ -0.69
APOC4P55056 AC133540.1-201ENST00000620845 1019 ntBASIC10.77□□□□□ -0.69
APOC4P55056 CU633904.3-201ENST00000624042 1029 ntBASIC10.77□□□□□ -0.69
APOC4P55056 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
APOC4P55056 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.77□□□□□ -0.69
APOC4P55056 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC10.77□□□□□ -0.69
APOC4P55056 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.77□□□□□ -0.69
APOC4P55056 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
APOC4P55056 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
APOC4P55056 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 AC046158.3-201ENST00000624947 2558 ntBASIC10.76□□□□□ -0.69
APOC4P55056 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
APOC4P55056 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms