Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
EPHA4P54764 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EPHA4P54764 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EPHA4P54764 TMBIM7P-202ENST00000641474 1516 ntBASIC14.15□□□□□ -0.14
EPHA4P54764 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
EPHA4P54764 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA4P54764 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.15□□□□□ -0.15
EPHA4P54764 CICP23-201ENST00000605013 2741 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 CYP4F23P-201ENST00000593402 1579 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 KRT8P21-201ENST00000430398 1491 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EPHA4P54764 XBP1P1-201ENST00000436573 652 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 MAGEA5-201ENST00000446757 942 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 IMP3P2-201ENST00000489760 475 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 POU5F1P2-201ENST00000521750 823 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.14□□□□□ -0.15
EPHA4P54764 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA4P54764 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
EPHA4P54764 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA4P54764 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 AL157813.1-201ENST00000612996 587 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 AL353770.1-201ENST00000614915 403 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EPHA4P54764 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 SNX18-202ENST00000343017 3140 ntBASIC14.14□□□□□ -0.15
EPHA4P54764 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA4P54764 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA4P54764 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
EPHA4P54764 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 AC091951.1-201ENST00000512854 2465 ntBASIC14.13□□□□□ -0.15
EPHA4P54764 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 AC092506.1-202ENST00000401022 528 ntBASIC14.13□□□□□ -0.15
EPHA4P54764 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.13□□□□□ -0.15
EPHA4P54764 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.13□□□□□ -0.15
EPHA4P54764 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 FGFR3P5-201ENST00000564496 886 ntBASIC14.13□□□□□ -0.15
EPHA4P54764 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms