Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK7P50613 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 RN7SL470P-201ENST00000583069 259 ntBASIC16.15■□□□□ 0.18
CDK7P50613 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK7P50613 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK7P50613 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CDK7P50613 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK7P50613 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDK7P50613 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDK7P50613 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 PPT1-215ENST00000641471 2368 ntBASIC16.15■□□□□ 0.18
CDK7P50613 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CDK7P50613 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CDK7P50613 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 AC020658.6-201ENST00000623564 1870 ntBASIC16.14■□□□□ 0.17
CDK7P50613 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK7P50613 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.14■□□□□ 0.17
CDK7P50613 RN7SL530P-201ENST00000485097 298 ntBASIC16.14■□□□□ 0.17
CDK7P50613 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK7P50613 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.14■□□□□ 0.17
CDK7P50613 AL022344.2-201ENST00000568976 968 ntBASIC16.14■□□□□ 0.17
CDK7P50613 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK7P50613 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.14■□□□□ 0.17
CDK7P50613 FO393412.1-201ENST00000619841 382 ntBASIC16.14■□□□□ 0.17
CDK7P50613 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK7P50613 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK7P50613 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK7P50613 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.13■□□□□ 0.17
CDK7P50613 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDK7P50613 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK7P50613 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDK7P50613 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.13■□□□□ 0.17
CDK7P50613 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK7P50613 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK7P50613 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK7P50613 CR383656.3-201ENST00000551315 183 ntBASIC16.13■□□□□ 0.17
CDK7P50613 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK7P50613 MIR5196-201ENST00000578146 115 ntBASIC16.13■□□□□ 0.17
CDK7P50613 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK7P50613 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK7P50613 LINC00431-202ENST00000636375 159 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms