Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.03□□□□□ -0.32
SOX2P48431 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SOX2P48431 AL391069.4-201ENST00000609583 481 ntBASIC13.03□□□□□ -0.32
SOX2P48431 AL590560.3-201ENST00000623350 461 ntBASIC13.03□□□□□ -0.32
SOX2P48431 CICP20-201ENST00000443330 2801 ntBASIC13.03□□□□□ -0.32
SOX2P48431 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.03□□□□□ -0.32
SOX2P48431 AL136172.1-201ENST00000598590 1394 ntBASIC13.03□□□□□ -0.32
SOX2P48431 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SOX2P48431 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.03□□□□□ -0.32
SOX2P48431 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SOX2P48431 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.03□□□□□ -0.32
SOX2P48431 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SOX2P48431 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SOX2P48431 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.02□□□□□ -0.32
SOX2P48431 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 SALL4P5-201ENST00000419001 1760 ntBASIC13.02□□□□□ -0.32
SOX2P48431 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SOX2P48431 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.02□□□□□ -0.32
SOX2P48431 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SOX2P48431 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SOX2P48431 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 KRT18P13-201ENST00000400056 1290 ntBASIC13.02□□□□□ -0.33
SOX2P48431 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.02□□□□□ -0.33
SOX2P48431 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 MYADML-201ENST00000474610 2147 ntBASIC13.02□□□□□ -0.33
SOX2P48431 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.02□□□□□ -0.33
SOX2P48431 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SOX2P48431 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SOX2P48431 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SOX2P48431 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.01□□□□□ -0.33
SOX2P48431 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.01□□□□□ -0.33
SOX2P48431 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.01□□□□□ -0.33
SOX2P48431 AC004967.1-201ENST00000453589 447 ntBASIC13.01□□□□□ -0.33
SOX2P48431 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.01□□□□□ -0.33
SOX2P48431 AC026434.2-201ENST00000506094 1078 ntBASIC13.01□□□□□ -0.33
SOX2P48431 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.01□□□□□ -0.33
SOX2P48431 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms