Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 BEND3P1-201ENST00000421591 1944 ntBASIC14.14□□□□□ -0.15
SLC6A12P48065 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC6A12P48065 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 AC099336.1-201ENST00000417053 1171 ntBASIC14.14□□□□□ -0.15
SLC6A12P48065 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 AC119751.2-201ENST00000504529 210 ntBASIC14.14□□□□□ -0.15
SLC6A12P48065 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC6A12P48065 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC6A12P48065 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC6A12P48065 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC6A12P48065 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC6A12P48065 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC6A12P48065 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
SLC6A12P48065 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC6A12P48065 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 TUBB8P4-201ENST00000511806 1324 ntBASIC14.14□□□□□ -0.15
SLC6A12P48065 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC6A12P48065 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 AL161772.1-201ENST00000610494 4412 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 AL359881.3-201ENST00000602640 1721 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC6A12P48065 AC079178.1-201ENST00000420915 656 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 CSF2RBP1-201ENST00000447905 391 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC6A12P48065 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC6A12P48065 DUX4L45-201ENST00000566406 1057 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 AC090643.2-201ENST00000623442 2029 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 AC244394.1-201ENST00000435000 1665 ntBASIC14.13□□□□□ -0.15
SLC6A12P48065 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC6A12P48065 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC6A12P48065 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC6A12P48065 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC6A12P48065 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms