Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CXCL12P48061 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL12P48061 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.42□□□□□ -0.1
CXCL12P48061 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL12P48061 GOLGA2P7-209ENST00000560408 745 ntBASIC14.42□□□□□ -0.1
CXCL12P48061 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 DGAT2L7P-201ENST00000602462 744 ntBASIC14.42□□□□□ -0.1
CXCL12P48061 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL12P48061 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CXCL12P48061 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 CICP23-201ENST00000605013 2741 ntBASIC14.42□□□□□ -0.1
CXCL12P48061 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.42□□□□□ -0.1
CXCL12P48061 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 AC015688.4-201ENST00000580780 1647 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 MIR1301-201ENST00000408518 82 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC108734.2-201ENST00000420887 1069 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 VENTXP4-201ENST00000449029 958 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC063952.3-201ENST00000467756 308 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC093826.1-201ENST00000508655 993 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 NDUFB10P1-201ENST00000567319 521 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL12P48061 AC006483.2-201ENST00000609813 515 ntBASIC14.41□□□□□ -0.1
CXCL12P48061 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CXCL12P48061 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL12P48061 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL12P48061 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL12P48061 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL12P48061 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms