Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CBX5P45973 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 INE2-201ENST00000630399 1874 ntBASIC12.78□□□□□ -0.36
CBX5P45973 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 AC016397.2-201ENST00000624848 1985 ntBASIC12.78□□□□□ -0.36
CBX5P45973 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.77□□□□□ -0.36
CBX5P45973 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CBX5P45973 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.77□□□□□ -0.36
CBX5P45973 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CBX5P45973 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.77□□□□□ -0.36
CBX5P45973 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CBX5P45973 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CBX5P45973 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 AL590627.1-203ENST00000421194 1026 ntBASIC12.77□□□□□ -0.37
CBX5P45973 TPM4P1-201ENST00000436100 807 ntBASIC12.77□□□□□ -0.37
CBX5P45973 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.77□□□□□ -0.37
CBX5P45973 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.77□□□□□ -0.37
CBX5P45973 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.77□□□□□ -0.37
CBX5P45973 AC026150.2-201ENST00000564693 1156 ntBASIC12.77□□□□□ -0.37
CBX5P45973 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.77□□□□□ -0.37
CBX5P45973 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
CBX5P45973 AC000095.1-201ENST00000603208 874 ntBASIC12.77□□□□□ -0.37
CBX5P45973 AF228730.6-201ENST00000641497 218 ntBASIC12.77□□□□□ -0.37
CBX5P45973 AC084121.3-201ENST00000641716 218 ntBASIC12.77□□□□□ -0.37
CBX5P45973 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.77□□□□□ -0.37
CBX5P45973 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.77□□□□□ -0.37
CBX5P45973 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.77□□□□□ -0.37
CBX5P45973 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CBX5P45973 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CBX5P45973 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CBX5P45973 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.76□□□□□ -0.37
CBX5P45973 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.76□□□□□ -0.37
CBX5P45973 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 TMEM198B-204ENST00000484016 896 ntBASIC12.76□□□□□ -0.37
CBX5P45973 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 AC022145.2-201ENST00000598203 171 ntBASIC12.76□□□□□ -0.37
CBX5P45973 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.76□□□□□ -0.37
CBX5P45973 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms