Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CICP23-201ENST00000605013 2741 ntBASIC13.53□□□□□ -0.24
RFC3P40938 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.53□□□□□ -0.24
RFC3P40938 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 AC016700.1-201ENST00000429424 312 ntBASIC13.53□□□□□ -0.24
RFC3P40938 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.53□□□□□ -0.24
RFC3P40938 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.53□□□□□ -0.24
RFC3P40938 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 AC104073.2-201ENST00000453737 312 ntBASIC13.53□□□□□ -0.24
RFC3P40938 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.53□□□□□ -0.24
RFC3P40938 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.53□□□□□ -0.24
RFC3P40938 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.53□□□□□ -0.24
RFC3P40938 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 AC004899.1-201ENST00000424687 1714 ntBASIC13.53□□□□□ -0.24
RFC3P40938 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.52□□□□□ -0.24
RFC3P40938 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.52□□□□□ -0.24
RFC3P40938 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
RFC3P40938 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RFC3P40938 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RFC3P40938 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RFC3P40938 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.52□□□□□ -0.25
RFC3P40938 CYP46A4P-201ENST00000414953 267 ntBASIC13.52□□□□□ -0.25
RFC3P40938 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.52□□□□□ -0.25
RFC3P40938 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.52□□□□□ -0.25
RFC3P40938 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.52□□□□□ -0.25
RFC3P40938 AC084346.2-201ENST00000607097 949 ntBASIC13.52□□□□□ -0.25
RFC3P40938 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 AC022748.3-201ENST00000621828 275 ntBASIC13.52□□□□□ -0.25
RFC3P40938 AL162426.1-201ENST00000624141 743 ntBASIC13.52□□□□□ -0.25
RFC3P40938 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.52□□□□□ -0.25
RFC3P40938 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
RFC3P40938 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RFC3P40938 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RFC3P40938 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.52□□□□□ -0.25
RFC3P40938 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFC3P40938 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms