Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 NCLP1-201ENST00000445357 1963 ntBASIC16.8■□□□□ 0.28
CLCN1P35523 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN1P35523 FAM90A11P-201ENST00000518378 2218 ntBASIC16.8■□□□□ 0.28
CLCN1P35523 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN1P35523 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCN1P35523 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCN1P35523 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCN1P35523 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN1P35523 AC069120.2-201ENST00000524091 540 ntBASIC16.8■□□□□ 0.28
CLCN1P35523 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCN1P35523 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCN1P35523 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN1P35523 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 AC073592.8-201ENST00000624126 511 ntBASIC16.8■□□□□ 0.28
CLCN1P35523 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 MKRN5P-201ENST00000445263 1467 ntBASIC16.8■□□□□ 0.28
CLCN1P35523 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN1P35523 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCN1P35523 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 KRT18P28-201ENST00000453838 1332 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.79■□□□□ 0.28
CLCN1P35523 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 SERBP1P3-201ENST00000459980 809 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 AC097493.3-201ENST00000509725 367 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.79■□□□□ 0.28
CLCN1P35523 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.79■□□□□ 0.28
CLCN1P35523 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN1P35523 AF228730.6-201ENST00000641497 218 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 AC084121.3-201ENST00000641716 218 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLCN1P35523 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN1P35523 AC135782.3-201ENST00000562782 2105 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 AC024075.2-201ENST00000598112 1473 ntBASIC16.79■□□□□ 0.28
CLCN1P35523 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms