Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA5P30532 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA5P30532 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA5P30532 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHRNA5P30532 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA5P30532 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 LINC00554-201ENST00000564841 3011 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 OR7E115P-201ENST00000382617 1024 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 AP000354.1-201ENST00000396982 456 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 AL512599.1-201ENST00000430724 685 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 AL451000.1-201ENST00000451300 1186 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNA5P30532 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 RN7SL788P-201ENST00000460504 316 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 EEF1GP8-201ENST00000506566 1154 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 IGHEP2-201ENST00000519308 1256 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 AL132994.1-201ENST00000554098 400 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNA5P30532 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA5P30532 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA5P30532 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA5P30532 LAP3P2-201ENST00000454686 1454 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 ODCP-201ENST00000459650 1639 ntBASIC17.69■□□□□ 0.42
CHRNA5P30532 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA5P30532 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA5P30532 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRNA5P30532 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA5P30532 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 PPP1R2P4-201ENST00000424051 595 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNA5P30532 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA5P30532 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 AC005740.1-201ENST00000515639 522 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 AC018846.1-201ENST00000568231 183 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 AP005264.5-201ENST00000590066 467 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 AL359091.4-201ENST00000610052 409 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 AC084018.2-201ENST00000613093 2607 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA5P30532 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA5P30532 AL365203.3-201ENST00000609742 2057 ntBASIC17.68■□□□□ 0.42
CHRNA5P30532 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA5P30532 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA5P30532 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA5P30532 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms