Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.98□□□□□ -0.17
PTPN6P29350 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.98□□□□□ -0.17
PTPN6P29350 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.98□□□□□ -0.17
PTPN6P29350 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.98□□□□□ -0.17
PTPN6P29350 FO681548.1-201ENST00000455617 1132 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.98□□□□□ -0.17
PTPN6P29350 AP001889.1-201ENST00000525414 633 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.98□□□□□ -0.17
PTPN6P29350 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.98□□□□□ -0.17
PTPN6P29350 AC138696.2-201ENST00000607376 223 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 LRRC59-203ENST00000576448 1531 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 KHSRPP1-201ENST00000427983 1768 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 AC139712.1-201ENST00000378256 1875 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 AC090643.2-201ENST00000623442 2029 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.97□□□□□ -0.17
PTPN6P29350 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 AC005229.1-201ENST00000392885 409 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.97□□□□□ -0.17
PTPN6P29350 AL355864.2-201ENST00000447420 863 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 ACA64.2-201ENST00000459014 129 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.97□□□□□ -0.17
PTPN6P29350 HILS1-202ENST00000545329 423 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 RAB43P1-201ENST00000561790 589 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.97□□□□□ -0.17
PTPN6P29350 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.97□□□□□ -0.17
PTPN6P29350 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.97□□□□□ -0.17
PTPN6P29350 AL022328.1-201ENST00000610050 478 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.97□□□□□ -0.17
PTPN6P29350 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
PTPN6P29350 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PTPN6P29350 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms