Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RXRBP28702 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.66■□□□□ 0.58
RXRBP28702 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC18.66■□□□□ 0.58
RXRBP28702 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC18.66■□□□□ 0.58
RXRBP28702 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 AC104117.4-201ENST00000521486 847 ntBASIC18.66■□□□□ 0.58
RXRBP28702 CETN3-205ENST00000522842 664 ntTSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
RXRBP28702 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18.66■□□□□ 0.58
RXRBP28702 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC18.66■□□□□ 0.58
RXRBP28702 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.66■□□□□ 0.58
RXRBP28702 KF455155.1-201ENST00000604493 303 ntBASIC18.66■□□□□ 0.58
RXRBP28702 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.66■□□□□ 0.58
RXRBP28702 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RXRBP28702 AC069061.4-201ENST00000581294 1347 ntBASIC18.66■□□□□ 0.58
RXRBP28702 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RXRBP28702 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 LINC00528-201ENST00000600723 2160 ntBASIC18.65■□□□□ 0.58
RXRBP28702 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.65■□□□□ 0.58
RXRBP28702 RPL3P2-204ENST00000413027 1203 ntBASIC18.65■□□□□ 0.58
RXRBP28702 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC18.65■□□□□ 0.58
RXRBP28702 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 AC010202.1-201ENST00000551181 405 ntBASIC18.65■□□□□ 0.58
RXRBP28702 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC18.65■□□□□ 0.58
RXRBP28702 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 MIR6819-201ENST00000622122 61 ntBASIC18.65■□□□□ 0.58
RXRBP28702 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 FLJ38576-201ENST00000623820 2459 ntBASIC18.65■□□□□ 0.58
RXRBP28702 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.65■□□□□ 0.58
RXRBP28702 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 AC092135.3-201ENST00000624151 1846 ntBASIC18.65■□□□□ 0.58
RXRBP28702 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RXRBP28702 LAP3P2-201ENST00000454686 1454 ntBASIC18.65■□□□□ 0.58
RXRBP28702 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RXRBP28702 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RXRBP28702 GUCY2EP-203ENST00000531117 1918 ntBASIC18.64■□□□□ 0.58
RXRBP28702 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RXRBP28702 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.64■□□□□ 0.57
RXRBP28702 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 AC139143.1-201ENST00000441772 1207 ntBASIC18.64■□□□□ 0.57
RXRBP28702 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.64■□□□□ 0.57
RXRBP28702 JPT1-205ENST00000470924 663 ntTSL 5 BASIC18.64■□□□□ 0.57
RXRBP28702 CAP2-207ENST00000493172 861 ntTSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC18.64■□□□□ 0.57
RXRBP28702 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RXRBP28702 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC18.64■□□□□ 0.57
RXRBP28702 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RXRBP28702 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms