Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.98□□□□□ -0.01
NFKB1P19838 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.98□□□□□ -0.01
NFKB1P19838 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NFKB1P19838 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
NFKB1P19838 AL928921.2-201ENST00000641325 2442 ntBASIC14.98□□□□□ -0.01
NFKB1P19838 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.98□□□□□ -0.01
NFKB1P19838 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NFKB1P19838 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.98□□□□□ -0.01
NFKB1P19838 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
NFKB1P19838 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NFKB1P19838 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.98□□□□□ -0.01
NFKB1P19838 KRT8P28-201ENST00000433288 1390 ntBASIC14.98□□□□□ -0.01
NFKB1P19838 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NFKB1P19838 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NFKB1P19838 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 GRK6P1-201ENST00000400595 1711 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NFKB1P19838 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.97□□□□□ -0.01
NFKB1P19838 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 AC005034.1-201ENST00000426657 489 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 U91328.1-201ENST00000437528 223 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 AC234783.1-201ENST00000441761 496 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.97□□□□□ -0.01
NFKB1P19838 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.97□□□□□ -0.01
NFKB1P19838 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 AC106886.1-201ENST00000568660 600 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 AL512343.1-201ENST00000605837 169 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 MIR6074-201ENST00000612054 107 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 ZACNP1-201ENST00000612259 710 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 AL162274.1-201ENST00000617191 1098 ntBASIC14.97□□□□□ -0.01
NFKB1P19838 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.97□□□□□ -0.01
NFKB1P19838 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.97□□□□□ -0.01
NFKB1P19838 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NFKB1P19838 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NFKB1P19838 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.96□□□□□ -0.01
NFKB1P19838 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
NFKB1P19838 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.96□□□□□ -0.01
NFKB1P19838 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
NFKB1P19838 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NFKB1P19838 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NFKB1P19838 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFKB1P19838 ANKRD19P-201ENST00000338192 862 ntBASIC14.96□□□□□ -0.01
NFKB1P19838 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.96□□□□□ -0.01
NFKB1P19838 AC079776.1-201ENST00000401540 1152 ntBASIC14.96□□□□□ -0.01
NFKB1P19838 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.96□□□□□ -0.01
NFKB1P19838 BOLA2P3-201ENST00000404566 256 ntBASIC14.96□□□□□ -0.01
NFKB1P19838 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms