Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 AC004840.1-201ENST00000636359 365 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.07□□□□□ -0.48
DEFA4P12838 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
DEFA4P12838 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
DEFA4P12838 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
DEFA4P12838 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
DEFA4P12838 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
DEFA4P12838 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.06□□□□□ -0.48
DEFA4P12838 AL589987.1-201ENST00000453380 819 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.06□□□□□ -0.48
DEFA4P12838 AC092183.1-201ENST00000469884 875 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 RN7SL399P-201ENST00000471648 279 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.06□□□□□ -0.48
DEFA4P12838 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.06□□□□□ -0.48
DEFA4P12838 RFPL4AP1-201ENST00000530883 850 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
DEFA4P12838 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
DEFA4P12838 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 AL049840.4-201ENST00000602422 811 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 AL390955.2-201ENST00000603032 514 ntBASIC12.06□□□□□ -0.48
DEFA4P12838 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
DEFA4P12838 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.06□□□□□ -0.48
DEFA4P12838 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
DEFA4P12838 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
DEFA4P12838 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.05□□□□□ -0.48
DEFA4P12838 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
DEFA4P12838 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.05□□□□□ -0.48
DEFA4P12838 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.05□□□□□ -0.48
DEFA4P12838 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
DEFA4P12838 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.05□□□□□ -0.48
DEFA4P12838 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms