Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 SSR4-202ENST00000370085 526 ntTSL 2 BASIC24.83■■□□□ 1.57
TOP2AP11388 GGTLC4P-201ENST00000402176 664 ntBASIC24.83■■□□□ 1.57
TOP2AP11388 AF274858.1-201ENST00000406288 372 ntBASIC24.83■■□□□ 1.57
TOP2AP11388 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC24.83■■□□□ 1.57
TOP2AP11388 AC092903.1-201ENST00000466506 262 ntBASIC24.83■■□□□ 1.57
TOP2AP11388 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC24.83■■□□□ 1.57
TOP2AP11388 RN7SL288P-201ENST00000490496 291 ntBASIC24.83■■□□□ 1.57
TOP2AP11388 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC24.83■■□□□ 1.57
TOP2AP11388 MTHFR-210ENST00000641407 2387 ntBASIC24.83■■□□□ 1.57
TOP2AP11388 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC24.83■■□□□ 1.57
TOP2AP11388 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TOP2AP11388 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TOP2AP11388 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC24.82■■□□□ 1.56
TOP2AP11388 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC24.82■■□□□ 1.56
TOP2AP11388 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC24.82■■□□□ 1.56
TOP2AP11388 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 CD81-209ENST00000492627 886 ntTSL 3 BASIC24.82■■□□□ 1.56
TOP2AP11388 IGHEP2-201ENST00000519308 1256 ntBASIC24.82■■□□□ 1.56
TOP2AP11388 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC24.82■■□□□ 1.56
TOP2AP11388 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC24.82■■□□□ 1.56
TOP2AP11388 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC24.82■■□□□ 1.56
TOP2AP11388 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TOP2AP11388 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC24.82■■□□□ 1.56
TOP2AP11388 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC24.82■■□□□ 1.56
TOP2AP11388 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TOP2AP11388 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TOP2AP11388 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 USP17L6P-201ENST00000382470 1197 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 ACTBP14-201ENST00000411655 1089 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC24.81■■□□□ 1.56
TOP2AP11388 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TOP2AP11388 COQ10BP2-201ENST00000513804 724 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TOP2AP11388 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC24.81■■□□□ 1.56
TOP2AP11388 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 AC092570.1-201ENST00000414446 469 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 ASS1P2-201ENST00000439895 1223 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 GALP-202ENST00000440823 889 ntTSL 5 BASIC24.81■■□□□ 1.56
TOP2AP11388 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 RPS18P9-201ENST00000482817 460 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC24.81■■□□□ 1.56
TOP2AP11388 MIR5001-201ENST00000580185 100 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC24.81■■□□□ 1.56
TOP2AP11388 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 AC073869.4-201ENST00000620841 800 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC24.81■■□□□ 1.56
TOP2AP11388 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TOP2AP11388 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC24.81■■□□□ 1.56
TOP2AP11388 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC24.8■■□□□ 1.56
TOP2AP11388 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC24.8■■□□□ 1.56
TOP2AP11388 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TOP2AP11388 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC24.8■■□□□ 1.56
TOP2AP11388 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TOP2AP11388 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TOP2AP11388 AL139158.3-201ENST00000641212 1562 ntBASIC24.8■■□□□ 1.56
TOP2AP11388 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC24.8■■□□□ 1.56
TOP2AP11388 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC24.8■■□□□ 1.56
TOP2AP11388 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC24.8■■□□□ 1.56
TOP2AP11388 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC24.8■■□□□ 1.56
TOP2AP11388 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TOP2AP11388 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC24.8■■□□□ 1.56
TOP2AP11388 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms