Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 TMBIM7P-203ENST00000641617 1718 ntBASIC11.53□□□□□ -0.56
CD28P10747 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CD28P10747 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 HINT2P1-201ENST00000419438 481 ntBASIC11.53□□□□□ -0.56
CD28P10747 TLE1P1-201ENST00000422965 589 ntBASIC11.53□□□□□ -0.56
CD28P10747 PTPA-217ENST00000434095 870 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 AC012441.2-201ENST00000444843 739 ntBASIC11.53□□□□□ -0.56
CD28P10747 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.53□□□□□ -0.56
CD28P10747 RCC2P8-201ENST00000502779 1035 ntBASIC11.53□□□□□ -0.56
CD28P10747 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 AC090857.1-201ENST00000527400 390 ntBASIC11.53□□□□□ -0.56
CD28P10747 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CD28P10747 SNORD3B-2-202ENST00000571722 791 ntBASIC11.53□□□□□ -0.56
CD28P10747 AC008825.2-201ENST00000603374 718 ntBASIC11.53□□□□□ -0.56
CD28P10747 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 WASH3P-207ENST00000560956 1394 ntBASIC11.53□□□□□ -0.56
CD28P10747 PPT1-215ENST00000641471 2368 ntBASIC11.53□□□□□ -0.56
CD28P10747 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.52□□□□□ -0.56
CD28P10747 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CD28P10747 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CD28P10747 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.56
CD28P10747 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
CD28P10747 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CD28P10747 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.52□□□□□ -0.56
CD28P10747 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CD28P10747 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CD28P10747 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 RN7SKP214-201ENST00000364208 315 ntBASIC11.52□□□□□ -0.57
CD28P10747 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 SCARNA21-201ENST00000517026 139 ntBASIC11.52□□□□□ -0.57
CD28P10747 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
CD28P10747 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 AL161670.2-201ENST00000557650 1227 ntBASIC11.52□□□□□ -0.57
CD28P10747 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 MIR3907-201ENST00000579424 151 ntBASIC11.52□□□□□ -0.57
CD28P10747 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.52□□□□□ -0.57
CD28P10747 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 AC009884.2-201ENST00000603110 324 ntBASIC11.52□□□□□ -0.57
CD28P10747 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 NAP1L6-202ENST00000641404 1222 ntBASIC11.52□□□□□ -0.57
CD28P10747 LINC02228-204ENST00000642115 2962 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms