Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 AL139008.1-201ENST00000437894 228 ntBASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 OR5BD1P-201ENST00000532527 817 ntBASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 AL591471.1-201ENST00000621855 229 ntBASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSB-PGBD3P0DP91 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.27■□□□□ 0.67
CSB-PGBD3P0DP91 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 OR8T1P-201ENST00000421347 918 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 BCAS2P2-201ENST00000425064 674 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 RN7SL396P-201ENST00000471086 295 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC007952.4-201ENST00000573866 637 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 RN7SL357P-201ENST00000581065 298 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 MIR2392-201ENST00000584881 84 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AC011247.3-201ENST00000603297 438 ntBASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSB-PGBD3P0DP91 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AC015688.4-201ENST00000580780 1647 ntBASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PSMD4P1-201ENST00000433951 1109 ntBASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AC092580.1-201ENST00000433998 658 ntBASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AC073592.2-201ENST00000623062 780 ntBASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 AL451007.2-201ENST00000632004 563 ntBASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms