Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FAM228BP0C875 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.68■□□□□ 0.1
FAM228BP0C875 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.68■□□□□ 0.1
FAM228BP0C875 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 MIR5189-201ENST00000577370 114 ntBASIC15.68■□□□□ 0.1
FAM228BP0C875 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.68■□□□□ 0.1
FAM228BP0C875 AL096865.1-201ENST00000606796 927 ntBASIC15.68■□□□□ 0.1
FAM228BP0C875 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.68■□□□□ 0.1
FAM228BP0C875 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.68■□□□□ 0.1
FAM228BP0C875 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
FAM228BP0C875 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
FAM228BP0C875 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
FAM228BP0C875 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
FAM228BP0C875 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
FAM228BP0C875 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FAM228BP0C875 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FAM228BP0C875 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.67■□□□□ 0.1
FAM228BP0C875 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 AC106760.1-201ENST00000508690 800 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.67■□□□□ 0.1
FAM228BP0C875 AP003171.2-201ENST00000528208 925 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.67■□□□□ 0.1
FAM228BP0C875 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.67■□□□□ 0.1
FAM228BP0C875 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.67■□□□□ 0.1
FAM228BP0C875 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 SPCS2P1-201ENST00000561636 679 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 AC106820.3-201ENST00000561653 397 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 TP53TG3HP-202ENST00000569755 579 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 MIR600HG-201ENST00000449175 5984 ntBASIC15.67■□□□□ 0.1
FAM228BP0C875 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FAM228BP0C875 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM228BP0C875 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM228BP0C875 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
FAM228BP0C875 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 KRT8P28-201ENST00000433288 1390 ntBASIC15.66■□□□□ 0.1
FAM228BP0C875 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
FAM228BP0C875 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM228BP0C875 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM228BP0C875 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM228BP0C875 AC068587.3-201ENST00000526613 355 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms