Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 MIR663B-201ENST00000408361 115 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 SLC25A24P2-201ENST00000415059 510 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 AC091804.1-201ENST00000486888 567 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 ZNF767P-206ENST00000513792 565 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 SCARNA20.5-201ENST00000516991 142 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 HMGB1P8-201ENST00000558211 949 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PPY2P-201ENST00000582808 702 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 FGD5P1-202ENST00000614866 2498 ntBASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNYL3P0C7X3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AC055811.4-201ENST00000624039 1754 ntBASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AC007191.1-201ENST00000623179 2995 ntBASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 FTLP10-202ENST00000505798 471 ntBASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNYL3P0C7X3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms