Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR346-201ENST00000362234 95 ntBASIC11.44□□□□□ -0.58
CXCL1P09341 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CXCL1P09341 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
CXCL1P09341 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.44□□□□□ -0.58
CXCL1P09341 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.44□□□□□ -0.58
CXCL1P09341 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.44□□□□□ -0.58
CXCL1P09341 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CXCL1P09341 AL135744.1-201ENST00000565098 629 ntBASIC11.44□□□□□ -0.58
CXCL1P09341 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.44□□□□□ -0.58
CXCL1P09341 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 AL049840.3-201ENST00000602669 611 ntBASIC11.44□□□□□ -0.58
CXCL1P09341 AC064836.3-201ENST00000607928 673 ntBASIC11.44□□□□□ -0.58
CXCL1P09341 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
CXCL1P09341 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CXCL1P09341 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CXCL1P09341 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.44□□□□□ -0.58
CXCL1P09341 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.43□□□□□ -0.58
CXCL1P09341 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.43□□□□□ -0.58
CXCL1P09341 FO393414.2-201ENST00000405153 598 ntBASIC11.43□□□□□ -0.58
CXCL1P09341 AZGP1P1-201ENST00000411909 902 ntBASIC11.43□□□□□ -0.58
CXCL1P09341 AL355306.1-201ENST00000415580 579 ntBASIC11.43□□□□□ -0.58
CXCL1P09341 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.43□□□□□ -0.58
CXCL1P09341 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.43□□□□□ -0.58
CXCL1P09341 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 KRT8P23-201ENST00000560090 1207 ntBASIC11.43□□□□□ -0.58
CXCL1P09341 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.43□□□□□ -0.58
CXCL1P09341 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 AC010536.1-201ENST00000538868 2611 ntBASIC11.43□□□□□ -0.58
CXCL1P09341 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CXCL1P09341 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.43□□□□□ -0.58
CXCL1P09341 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CXCL1P09341 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL1P09341 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms