Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS1P07996 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.57□□□□□ -0.24
THBS1P07996 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
THBS1P07996 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
THBS1P07996 MIR1909-201ENST00000411312 80 ntBASIC13.57□□□□□ -0.24
THBS1P07996 AC004945.1-201ENST00000416738 983 ntBASIC13.57□□□□□ -0.24
THBS1P07996 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 AC022210.1-201ENST00000449856 793 ntBASIC13.57□□□□□ -0.24
THBS1P07996 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC13.57□□□□□ -0.24
THBS1P07996 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.57□□□□□ -0.24
THBS1P07996 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 SLC25A47P1-201ENST00000531577 414 ntBASIC13.57□□□□□ -0.24
THBS1P07996 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.57□□□□□ -0.24
THBS1P07996 MIR6805-201ENST00000615055 62 ntBASIC13.57□□□□□ -0.24
THBS1P07996 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.57□□□□□ -0.24
THBS1P07996 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 AC009093.2-202ENST00000620513 2079 ntBASIC13.57□□□□□ -0.24
THBS1P07996 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
THBS1P07996 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
THBS1P07996 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
THBS1P07996 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
THBS1P07996 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
THBS1P07996 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.56□□□□□ -0.24
THBS1P07996 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.56□□□□□ -0.24
THBS1P07996 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 FAM8A4P-201ENST00000435433 1213 ntBASIC13.56□□□□□ -0.24
THBS1P07996 RPS2P32-201ENST00000439199 892 ntBASIC13.56□□□□□ -0.24
THBS1P07996 USP32P1-208ENST00000506594 1164 ntBASIC13.56□□□□□ -0.24
THBS1P07996 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.56□□□□□ -0.24
THBS1P07996 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
THBS1P07996 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.56□□□□□ -0.24
THBS1P07996 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.56□□□□□ -0.24
THBS1P07996 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms