Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APOC1P02654 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC1P02654 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 AC007541.1-201ENST00000570282 1469 ntBASIC13.12□□□□□ -0.31
APOC1P02654 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APOC1P02654 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APOC1P02654 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 AL359711.2-201ENST00000563105 872 ntBASIC13.12□□□□□ -0.31
APOC1P02654 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 AP001063.1-201ENST00000568332 529 ntBASIC13.12□□□□□ -0.31
APOC1P02654 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 AC009486.1-201ENST00000569860 813 ntBASIC13.12□□□□□ -0.31
APOC1P02654 AL132655.2-201ENST00000596276 594 ntBASIC13.12□□□□□ -0.31
APOC1P02654 AC004790.1-201ENST00000612686 536 ntBASIC13.12□□□□□ -0.31
APOC1P02654 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.12□□□□□ -0.31
APOC1P02654 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 AC015802.1-201ENST00000588104 1449 ntBASIC13.12□□□□□ -0.31
APOC1P02654 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC1P02654 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC1P02654 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APOC1P02654 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC1P02654 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC1P02654 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
APOC1P02654 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 RNU1-114P-201ENST00000365297 166 ntBASIC13.11□□□□□ -0.31
APOC1P02654 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 ACTBP8-201ENST00000403258 1108 ntBASIC13.11□□□□□ -0.31
APOC1P02654 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.11□□□□□ -0.31
APOC1P02654 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC1P02654 MYCLP2-201ENST00000449268 967 ntBASIC13.11□□□□□ -0.31
APOC1P02654 TSPY16P-201ENST00000449843 468 ntBASIC13.11□□□□□ -0.31
APOC1P02654 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.11□□□□□ -0.31
APOC1P02654 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms