Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
IFNA1P01562 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 AC002056.1-201ENST00000395613 760 ntBASIC11.69□□□□□ -0.54
IFNA1P01562 IGLL3P-201ENST00000412472 434 ntBASIC11.69□□□□□ -0.54
IFNA1P01562 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 RHOQP3-201ENST00000437982 621 ntBASIC11.69□□□□□ -0.54
IFNA1P01562 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.69□□□□□ -0.54
IFNA1P01562 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 AC131902.2-201ENST00000566892 2172 ntBASIC11.69□□□□□ -0.54
IFNA1P01562 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.69□□□□□ -0.54
IFNA1P01562 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IFNA1P01562 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.69□□□□□ -0.54
IFNA1P01562 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
IFNA1P01562 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 MYADML-201ENST00000474610 2147 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 AP002008.2-201ENST00000635926 4870 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
IFNA1P01562 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.68□□□□□ -0.54
IFNA1P01562 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.68□□□□□ -0.54
IFNA1P01562 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.68□□□□□ -0.54
IFNA1P01562 RARRES2P8-201ENST00000566335 367 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.68□□□□□ -0.54
IFNA1P01562 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
IFNA1P01562 AC027307.2-201ENST00000591252 911 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 AC008267.7-201ENST00000624570 1194 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 NCLP1-201ENST00000445357 1963 ntBASIC11.68□□□□□ -0.54
IFNA1P01562 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.68□□□□□ -0.54
IFNA1P01562 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IFNA1P01562 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
IFNA1P01562 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms