Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR1AO95602 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR1AO95602 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR1AO95602 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR1AO95602 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR1AO95602 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR1AO95602 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR1AO95602 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR1AO95602 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR1AO95602 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR1AO95602 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
POLR1AO95602 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.77■□□□□ 0.91
POLR1AO95602 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
POLR1AO95602 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
POLR1AO95602 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
POLR1AO95602 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
POLR1AO95602 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC20.76■□□□□ 0.91
POLR1AO95602 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.76■□□□□ 0.91
POLR1AO95602 RNA5SP406-201ENST00000516106 112 ntBASIC20.76■□□□□ 0.91
POLR1AO95602 AC068831.5-201ENST00000557387 328 ntBASIC20.76■□□□□ 0.91
POLR1AO95602 AL590235.1-201ENST00000564650 861 ntBASIC20.76■□□□□ 0.91
POLR1AO95602 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1AO95602 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 AC015802.1-201ENST00000588104 1449 ntBASIC20.76■□□□□ 0.91
POLR1AO95602 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.76■□□□□ 0.91
POLR1AO95602 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
POLR1AO95602 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1AO95602 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 SNORA57-201ENST00000383870 149 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 BPIFB5P-201ENST00000457066 1099 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 RN7SL530P-201ENST00000485097 298 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 KRT8P2-201ENST00000556193 944 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 AC023908.3-201ENST00000564211 3047 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 AC097359.2-201ENST00000604992 2389 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
POLR1AO95602 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1AO95602 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms