Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD4O95243 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
MBD4O95243 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD4O95243 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MBD4O95243 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 RN7SKP214-201ENST00000364208 315 ntBASIC17.46■□□□□ 0.39
MBD4O95243 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 RN7SL11P-201ENST00000471305 293 ntBASIC17.46■□□□□ 0.39
MBD4O95243 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD4O95243 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD4O95243 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD4O95243 SORD2P-201ENST00000558556 1069 ntBASIC17.46■□□□□ 0.39
MBD4O95243 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD4O95243 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD4O95243 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD4O95243 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MBD4O95243 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MBD4O95243 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD4O95243 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
MBD4O95243 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MBD4O95243 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.46■□□□□ 0.38
MBD4O95243 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MBD4O95243 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 OR2R1P-201ENST00000441404 914 ntBASIC17.45■□□□□ 0.38
MBD4O95243 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD4O95243 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD4O95243 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 AC003686.1-201ENST00000550956 1034 ntBASIC17.45■□□□□ 0.38
MBD4O95243 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD4O95243 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.45■□□□□ 0.38
MBD4O95243 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms