Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 AC023090.2-201ENST00000625182 2110 ntBASIC13.13□□□□□ -0.31
ALX3O95076 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.13□□□□□ -0.31
ALX3O95076 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.13□□□□□ -0.31
ALX3O95076 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 AC067863.1-201ENST00000494933 530 ntBASIC13.13□□□□□ -0.31
ALX3O95076 RNA5SP421-201ENST00000516864 134 ntBASIC13.13□□□□□ -0.31
ALX3O95076 AC109322.1-201ENST00000524499 1264 ntBASIC13.13□□□□□ -0.31
ALX3O95076 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
ALX3O95076 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 AL158211.3-201ENST00000607385 239 ntBASIC13.13□□□□□ -0.31
ALX3O95076 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.13□□□□□ -0.31
ALX3O95076 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.13□□□□□ -0.31
ALX3O95076 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALX3O95076 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALX3O95076 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.13□□□□□ -0.31
ALX3O95076 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.12□□□□□ -0.31
ALX3O95076 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ALX3O95076 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ALX3O95076 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
ALX3O95076 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.12□□□□□ -0.31
ALX3O95076 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.12□□□□□ -0.31
ALX3O95076 KLF2P3-201ENST00000451977 1087 ntBASIC13.12□□□□□ -0.31
ALX3O95076 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.12□□□□□ -0.31
ALX3O95076 MEIS3P1-201ENST00000495167 958 ntBASIC13.12□□□□□ -0.31
ALX3O95076 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.12□□□□□ -0.31
ALX3O95076 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ALX3O95076 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.12□□□□□ -0.31
ALX3O95076 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ALX3O95076 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms