Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AL157407.1-201ENST00000435784 904 ntBASIC13.78□□□□□ -0.2
CTNSO60931 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.78□□□□□ -0.2
CTNSO60931 AC021723.1-201ENST00000486306 515 ntBASIC13.78□□□□□ -0.2
CTNSO60931 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.78□□□□□ -0.2
CTNSO60931 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.78□□□□□ -0.2
CTNSO60931 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CTNSO60931 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.78□□□□□ -0.2
CTNSO60931 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 KRT8P29-201ENST00000420409 1371 ntBASIC13.78□□□□□ -0.2
CTNSO60931 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 AC215219.1-201ENST00000400706 1817 ntBASIC13.78□□□□□ -0.2
CTNSO60931 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTNSO60931 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTNSO60931 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTNSO60931 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.77□□□□□ -0.2
CTNSO60931 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.77□□□□□ -0.21
CTNSO60931 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.77□□□□□ -0.21
CTNSO60931 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.77□□□□□ -0.21
CTNSO60931 AP001267.2-201ENST00000532619 2086 ntBASIC13.77□□□□□ -0.21
CTNSO60931 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CTNSO60931 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.77□□□□□ -0.21
CTNSO60931 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.77□□□□□ -0.21
CTNSO60931 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.77□□□□□ -0.21
CTNSO60931 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 RN7SL219P-201ENST00000582872 296 ntBASIC13.77□□□□□ -0.21
CTNSO60931 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.77□□□□□ -0.21
CTNSO60931 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 AC005695.3-201ENST00000614522 232 ntBASIC13.77□□□□□ -0.21
CTNSO60931 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.77□□□□□ -0.21
CTNSO60931 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CTNSO60931 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTNSO60931 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.77□□□□□ -0.21
CTNSO60931 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.77□□□□□ -0.21
CTNSO60931 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTNSO60931 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.76□□□□□ -0.21
CTNSO60931 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTNSO60931 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms