Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KRT8P28-201ENST00000433288 1390 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 AC004899.1-201ENST00000424687 1714 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 AL008718.2-201ENST00000609206 1313 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHMP2AO43633 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHMP2AO43633 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 RPL18P13-201ENST00000478088 569 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CHMP2AO43633 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHMP2AO43633 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP2AO43633 AC022748.3-201ENST00000621828 275 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 MBLAC2-202ENST00000514906 1936 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 AL590440.2-201ENST00000641973 1595 ntBASIC16.54■□□□□ 0.24
CHMP2AO43633 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CHMP2AO43633 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP2AO43633 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP2AO43633 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 AL035414.1-201ENST00000451327 857 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 TUBB8P8-201ENST00000458717 1058 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP2AO43633 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 AC008805.1-201ENST00000590892 364 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.53■□□□□ 0.24
CHMP2AO43633 BNIP3P13-201ENST00000599968 566 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 AL023803.2-201ENST00000620080 638 ntBASIC16.53■□□□□ 0.24
CHMP2AO43633 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHMP2AO43633 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP2AO43633 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP2AO43633 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP2AO43633 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP2AO43633 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP2AO43633 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP2AO43633 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CHMP2AO43633 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP2AO43633 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHMP2AO43633 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP2AO43633 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms