Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN5O00501 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN5O00501 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 AL645939.5-201ENST00000606834 243 ntBASIC15.47■□□□□ 0.07
CLDN5O00501 MYO15B-237ENST00000642007 4893 ntBASIC15.47■□□□□ 0.07
CLDN5O00501 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDN5O00501 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLDN5O00501 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN5O00501 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLDN5O00501 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN5O00501 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN5O00501 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN5O00501 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN5O00501 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 MARK2P5-201ENST00000507649 634 ntBASIC15.46■□□□□ 0.07
CLDN5O00501 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN5O00501 AC026740.1-201ENST00000607068 791 ntBASIC15.46■□□□□ 0.07
CLDN5O00501 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN5O00501 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN5O00501 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.46■□□□□ 0.07
CLDN5O00501 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN5O00501 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDN5O00501 AL133338.1-201ENST00000565695 1517 ntBASIC15.46■□□□□ 0.07
CLDN5O00501 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLDN5O00501 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLDN5O00501 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN5O00501 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN5O00501 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CLDN5O00501 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN5O00501 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN5O00501 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 TUBBP5-203ENST00000508529 1334 ntBASIC15.45■□□□□ 0.06
CLDN5O00501 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 AC232323.1-201ENST00000540724 2099 ntBASIC15.45■□□□□ 0.06
CLDN5O00501 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN5O00501 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 CYP46A4P-201ENST00000414953 267 ntBASIC15.45■□□□□ 0.06
CLDN5O00501 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 SPTLC1P5-201ENST00000450718 252 ntBASIC15.45■□□□□ 0.06
CLDN5O00501 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.45■□□□□ 0.06
CLDN5O00501 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.45■□□□□ 0.06
CLDN5O00501 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 NDUFV2P1-201ENST00000596415 907 ntBASIC15.45■□□□□ 0.06
CLDN5O00501 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.45■□□□□ 0.06
CLDN5O00501 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDN5O00501 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN5O00501 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN5O00501 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDN5O00501 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN5O00501 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN5O00501 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms