Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 HSPA8P5-201ENST00000456928 2069 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 RN7SKP175-201ENST00000408472 289 ntBASIC11.86□□□□□ -0.51
SRRM4A7MD48 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 USP32P1-208ENST00000506594 1164 ntBASIC11.86□□□□□ -0.51
SRRM4A7MD48 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 AP003171.2-201ENST00000528208 925 ntBASIC11.86□□□□□ -0.51
SRRM4A7MD48 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SRRM4A7MD48 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
SRRM4A7MD48 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM4A7MD48 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM4A7MD48 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM4A7MD48 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM4A7MD48 AL590440.2-201ENST00000641973 1595 ntBASIC11.85□□□□□ -0.51
SRRM4A7MD48 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM4A7MD48 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.85□□□□□ -0.51
SRRM4A7MD48 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms