Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC005740.1-201ENST00000515639 522 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 KRT8P18-201ENST00000413425 1445 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 AC133141.1-201ENST00000443015 339 ntBASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 RN7SL838P-201ENST00000481676 295 ntBASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 RPSAP70-201ENST00000504462 864 ntBASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88BA6NKF7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 LILRP2-202ENST00000413572 1383 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC010491.1-201ENST00000563101 2797 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC073210.1-201ENST00000414799 232 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC022447.5-201ENST00000504817 392 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 ABCC6P1-203ENST00000565566 1170 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC126755.5-201ENST00000622756 267 ntBASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms