Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.32■■■□□ 2.12
ARFGEF1Q9Y6D6 AC096887.2-201ENST00000623443 1957 ntBASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 AC097639.1-201ENST00000565519 1891 ntBASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 MIR572-201ENST00000384983 95 ntBASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 AC009086.3-201ENST00000623486 1008 ntBASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
ARFGEF1Q9Y6D6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 IGHV3-19-201ENST00000521488 291 ntBASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 MIR3181-201ENST00000578512 73 ntBASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 TERF1P2-201ENST00000583350 1212 ntBASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ARFGEF1Q9Y6D6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 RAP2CP1-201ENST00000605103 478 ntBASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 AL354811.1-201ENST00000610286 706 ntBASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
ARFGEF1Q9Y6D6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ARFGEF1Q9Y6D6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ARFGEF1Q9Y6D6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 MIR6084-201ENST00000622012 110 ntBASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.27■■■□□ 2.12
ARFGEF1Q9Y6D6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 ESRRAP2-201ENST00000418437 1549 ntBASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.26■■■□□ 2.11
ARFGEF1Q9Y6D6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
ARFGEF1Q9Y6D6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARFGEF1Q9Y6D6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARFGEF1Q9Y6D6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ARFGEF1Q9Y6D6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
ARFGEF1Q9Y6D6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARFGEF1Q9Y6D6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARFGEF1Q9Y6D6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARFGEF1Q9Y6D6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARFGEF1Q9Y6D6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ARFGEF1Q9Y6D6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
ARFGEF1Q9Y6D6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ARFGEF1Q9Y6D6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.2■■■□□ 2.11
ARFGEF1Q9Y6D6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.2■■■□□ 2.1
ARFGEF1Q9Y6D6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARFGEF1Q9Y6D6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARFGEF1Q9Y6D6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARFGEF1Q9Y6D6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ARFGEF1Q9Y6D6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.18■■■□□ 2.1
ARFGEF1Q9Y6D6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms