Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 SERBP1P1-201ENST00000396021 1160 ntBASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HS3ST3A1Q9Y663 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
HS3ST3A1Q9Y663 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 AL136967.2-201ENST00000623968 743 ntBASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 ALDH1A3-203ENST00000557963 1670 ntBASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HS3ST3A1Q9Y663 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HS3ST3A1Q9Y663 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 AC011298.3-201ENST00000615796 283 ntBASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HS3ST3A1Q9Y663 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 ZNRF2P3-201ENST00000424200 374 ntBASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.48■■□□□ 1.19
HS3ST3A1Q9Y663 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 MIR4767-201ENST00000582827 78 ntBASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HS3ST3A1Q9Y663 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 MIR939-201ENST00000401314 82 ntBASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.46■■□□□ 1.19
HS3ST3A1Q9Y663 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HS3ST3A1Q9Y663 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 AF213884.3-201ENST00000563833 479 ntBASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HS3ST3A1Q9Y663 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 AP001330.3-201ENST00000520123 633 ntBASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.44■■□□□ 1.18
HS3ST3A1Q9Y663 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 AC091305.1-201ENST00000479476 895 ntBASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HS3ST3A1Q9Y663 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 AC142381.3-201ENST00000568208 1670 ntBASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms