Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA8Q9Y5H6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA8Q9Y5H6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA8Q9Y5H6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA8Q9Y5H6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA8Q9Y5H6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA8Q9Y5H6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 AL356740.2-201ENST00000601559 647 ntBASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 ALDH1A3-203ENST00000557963 1670 ntBASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA8Q9Y5H6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PCDHA8Q9Y5H6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA8Q9Y5H6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA8Q9Y5H6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHA8Q9Y5H6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA8Q9Y5H6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHA8Q9Y5H6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA8Q9Y5H6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDHA8Q9Y5H6 AC005703.6-201ENST00000623265 1329 ntBASIC26.14■■□□□ 1.77
PCDHA8Q9Y5H6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA8Q9Y5H6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHA8Q9Y5H6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA8Q9Y5H6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHA8Q9Y5H6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA8Q9Y5H6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHA8Q9Y5H6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 AC131281.2-201ENST00000520478 145 ntBASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA8Q9Y5H6 AC008406.3-201ENST00000620001 1374 ntBASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA8Q9Y5H6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA8Q9Y5H6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms