Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.87■■□□□ 1.41
SCML2Q9UQR0 LINC01124-201ENST00000409786 2117 ntBASIC23.87■■□□□ 1.41
SCML2Q9UQR0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCML2Q9UQR0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.86■■□□□ 1.41
SCML2Q9UQR0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.85■■□□□ 1.41
SCML2Q9UQR0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.84■■□□□ 1.41
SCML2Q9UQR0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SCML2Q9UQR0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SCML2Q9UQR0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCML2Q9UQR0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.83■■□□□ 1.4
SCML2Q9UQR0 AC009102.2-201ENST00000606772 1639 ntBASIC23.82■■□□□ 1.4
SCML2Q9UQR0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML2Q9UQR0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCML2Q9UQR0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
SCML2Q9UQR0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCML2Q9UQR0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.8■■□□□ 1.4
SCML2Q9UQR0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SCML2Q9UQR0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.79■■□□□ 1.4
SCML2Q9UQR0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML2Q9UQR0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCML2Q9UQR0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SCML2Q9UQR0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML2Q9UQR0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.75■■□□□ 1.39
SCML2Q9UQR0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCML2Q9UQR0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms