Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.75■■□□□ 1.23
NCDNQ9UBB6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
NCDNQ9UBB6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NCDNQ9UBB6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
NCDNQ9UBB6 AC009102.2-201ENST00000606772 1639 ntBASIC22.74■■□□□ 1.23
NCDNQ9UBB6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 ABHD17AP1-201ENST00000358206 933 ntBASIC22.73■■□□□ 1.23
NCDNQ9UBB6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.73■■□□□ 1.23
NCDNQ9UBB6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 AC009086.3-201ENST00000623486 1008 ntBASIC22.72■■□□□ 1.23
NCDNQ9UBB6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCDNQ9UBB6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 AC006455.2-201ENST00000429931 906 ntBASIC22.71■■□□□ 1.23
NCDNQ9UBB6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 CCDC92B-201ENST00000575506 885 ntBASIC22.71■■□□□ 1.23
NCDNQ9UBB6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 MIR6084-201ENST00000622012 110 ntBASIC22.71■■□□□ 1.23
NCDNQ9UBB6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
NCDNQ9UBB6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 MIR3181-201ENST00000578512 73 ntBASIC22.7■■□□□ 1.22
NCDNQ9UBB6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NCDNQ9UBB6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.69■■□□□ 1.22
NCDNQ9UBB6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.68■■□□□ 1.22
NCDNQ9UBB6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.68■■□□□ 1.22
NCDNQ9UBB6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 C17orf82-201ENST00000623772 1530 ntBASIC22.67■■□□□ 1.22
NCDNQ9UBB6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.67■■□□□ 1.22
NCDNQ9UBB6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 KRT18P14-201ENST00000534205 1250 ntBASIC22.66■■□□□ 1.22
NCDNQ9UBB6 AC012414.1-201ENST00000556676 535 ntBASIC22.66■■□□□ 1.22
NCDNQ9UBB6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCDNQ9UBB6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 AC080038.1-201ENST00000611274 1154 ntBASIC22.65■■□□□ 1.22
NCDNQ9UBB6 TMEM191A-211ENST00000637163 1067 ntBASIC22.65■■□□□ 1.22
NCDNQ9UBB6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.65■■□□□ 1.22
NCDNQ9UBB6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCDNQ9UBB6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCDNQ9UBB6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
NCDNQ9UBB6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms