Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH8Q9NYR8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RDH8Q9NYR8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RDH8Q9NYR8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH8Q9NYR8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.48■□□□□ 0.71
RDH8Q9NYR8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.47■□□□□ 0.71
RDH8Q9NYR8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 AC007029.1-201ENST00000604183 313 ntBASIC19.47■□□□□ 0.71
RDH8Q9NYR8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH8Q9NYR8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
RDH8Q9NYR8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH8Q9NYR8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 AC007375.3-201ENST00000600936 2314 ntBASIC19.45■□□□□ 0.7
RDH8Q9NYR8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 AC137767.1-201ENST00000602918 1920 ntBASIC19.45■□□□□ 0.7
RDH8Q9NYR8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH8Q9NYR8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RDH8Q9NYR8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 MIR6089-201ENST00000616698 64 ntBASIC19.43■□□□□ 0.7
RDH8Q9NYR8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH8Q9NYR8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RDH8Q9NYR8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 RAP2CP1-202ENST00000605179 643 ntBASIC19.41■□□□□ 0.7
RDH8Q9NYR8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 RNF165-205ENST00000588679 2904 ntBASIC19.41■□□□□ 0.7
RDH8Q9NYR8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RDH8Q9NYR8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms