Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 AL592293.1-201ENST00000502889 1188 ntBASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 ABHD17AP5-201ENST00000580133 923 ntBASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB16Q9NRJ7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB16Q9NRJ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 AL121603.2-201ENST00000557373 2117 ntBASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB16Q9NRJ7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB16Q9NRJ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB16Q9NRJ7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB16Q9NRJ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB16Q9NRJ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB16Q9NRJ7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms