Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
C12orf4Q9NQ89 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
C12orf4Q9NQ89 RAP2CP1-202ENST00000605179 643 ntBASIC19.58■□□□□ 0.72
C12orf4Q9NQ89 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
C12orf4Q9NQ89 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C12orf4Q9NQ89 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
C12orf4Q9NQ89 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
C12orf4Q9NQ89 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C12orf4Q9NQ89 DUSP8P5-201ENST00000422884 1815 ntBASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C12orf4Q9NQ89 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 AC026202.3-201ENST00000600805 1127 ntBASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf4Q9NQ89 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf4Q9NQ89 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C12orf4Q9NQ89 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
C12orf4Q9NQ89 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
C12orf4Q9NQ89 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf4Q9NQ89 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 LINC00565-201ENST00000562710 2331 ntBASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.52■□□□□ 0.72
C12orf4Q9NQ89 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
C12orf4Q9NQ89 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
C12orf4Q9NQ89 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
C12orf4Q9NQ89 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
C12orf4Q9NQ89 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms