Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 AL356740.2-201ENST00000601559 647 ntBASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATP13A1Q9HD20 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP13A1Q9HD20 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 MIR3621-201ENST00000580529 85 ntBASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 ALDH1A3-203ENST00000557963 1670 ntBASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ATP13A1Q9HD20 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
ATP13A1Q9HD20 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP13A1Q9HD20 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.33■■□□□ 1.33
ATP13A1Q9HD20 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.33■■□□□ 1.33
ATP13A1Q9HD20 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.33■■□□□ 1.32
ATP13A1Q9HD20 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP13A1Q9HD20 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP13A1Q9HD20 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.3■■□□□ 1.32
ATP13A1Q9HD20 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP13A1Q9HD20 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP13A1Q9HD20 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
ATP13A1Q9HD20 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
ATP13A1Q9HD20 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
ATP13A1Q9HD20 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.31
ATP13A1Q9HD20 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms