Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ELL3Q9HB65 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ELL3Q9HB65 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ELL3Q9HB65 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ELL3Q9HB65 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.74■□□□□ 0.75
ELL3Q9HB65 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ELL3Q9HB65 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ELL3Q9HB65 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ELL3Q9HB65 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.73■□□□□ 0.75
ELL3Q9HB65 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
ELL3Q9HB65 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
ELL3Q9HB65 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.73■□□□□ 0.75
ELL3Q9HB65 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.73■□□□□ 0.75
ELL3Q9HB65 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 BHLHE23-202ENST00000612929 1109 ntBASIC19.73■□□□□ 0.75
ELL3Q9HB65 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ELL3Q9HB65 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ELL3Q9HB65 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ELL3Q9HB65 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ELL3Q9HB65 AC087393.1-201ENST00000582896 145 ntBASIC19.72■□□□□ 0.75
ELL3Q9HB65 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ELL3Q9HB65 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ELL3Q9HB65 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ELL3Q9HB65 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ELL3Q9HB65 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.71■□□□□ 0.75
ELL3Q9HB65 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ELL3Q9HB65 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.71■□□□□ 0.75
ELL3Q9HB65 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.71■□□□□ 0.75
ELL3Q9HB65 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ELL3Q9HB65 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ELL3Q9HB65 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ELL3Q9HB65 AC090877.2-201ENST00000558441 1738 ntBASIC19.71■□□□□ 0.75
ELL3Q9HB65 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ELL3Q9HB65 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ELL3Q9HB65 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ELL3Q9HB65 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ELL3Q9HB65 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ELL3Q9HB65 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.7■□□□□ 0.74
ELL3Q9HB65 AL592295.1-201ENST00000400984 884 ntBASIC19.69■□□□□ 0.74
ELL3Q9HB65 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 AC010980.1-201ENST00000587192 1142 ntBASIC19.69■□□□□ 0.74
ELL3Q9HB65 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
ELL3Q9HB65 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ELL3Q9HB65 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ELL3Q9HB65 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ELL3Q9HB65 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 AC068473.5-201ENST00000616428 2072 ntBASIC19.68■□□□□ 0.74
ELL3Q9HB65 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ELL3Q9HB65 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.68■□□□□ 0.74
ELL3Q9HB65 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.67■□□□□ 0.74
ELL3Q9HB65 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.67■□□□□ 0.74
ELL3Q9HB65 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ELL3Q9HB65 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.67■□□□□ 0.74
ELL3Q9HB65 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.67■□□□□ 0.74
ELL3Q9HB65 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ELL3Q9HB65 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ELL3Q9HB65 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.66■□□□□ 0.74
ELL3Q9HB65 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
ELL3Q9HB65 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ELL3Q9HB65 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
ELL3Q9HB65 AC012676.1-201ENST00000574705 1949 ntBASIC19.66■□□□□ 0.74
ELL3Q9HB65 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ELL3Q9HB65 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ELL3Q9HB65 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ELL3Q9HB65 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ELL3Q9HB65 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ELL3Q9HB65 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ELL3Q9HB65 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms