Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS16Q9H269 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25■■□□□ 1.59
VPS16Q9H269 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS16Q9H269 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 AC131274.2-201ENST00000580697 1507 ntBASIC24.99■■□□□ 1.59
VPS16Q9H269 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.99■■□□□ 1.59
VPS16Q9H269 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS16Q9H269 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
VPS16Q9H269 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS16Q9H269 AC092068.2-201ENST00000590491 1708 ntBASIC24.98■■□□□ 1.59
VPS16Q9H269 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS16Q9H269 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.98■■□□□ 1.59
VPS16Q9H269 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
VPS16Q9H269 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS16Q9H269 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
VPS16Q9H269 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS16Q9H269 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS16Q9H269 AC011551.1-201ENST00000614101 683 ntBASIC24.97■■□□□ 1.59
VPS16Q9H269 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS16Q9H269 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
VPS16Q9H269 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS16Q9H269 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS16Q9H269 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
VPS16Q9H269 DUSP8P3-201ENST00000399571 1760 ntBASIC24.96■■□□□ 1.59
VPS16Q9H269 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS16Q9H269 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS16Q9H269 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS16Q9H269 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS16Q9H269 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.96■■□□□ 1.59
VPS16Q9H269 AC139795.1-202ENST00000500444 432 ntBASIC24.96■■□□□ 1.59
VPS16Q9H269 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS16Q9H269 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS16Q9H269 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.59
VPS16Q9H269 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS16Q9H269 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.95■■□□□ 1.58
VPS16Q9H269 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS16Q9H269 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS16Q9H269 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS16Q9H269 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS16Q9H269 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
VPS16Q9H269 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS16Q9H269 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS16Q9H269 AC079834.2-201ENST00000609776 1949 ntBASIC24.94■■□□□ 1.58
VPS16Q9H269 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS16Q9H269 ABHD17AP5-201ENST00000580133 923 ntBASIC24.94■■□□□ 1.58
VPS16Q9H269 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.94■■□□□ 1.58
VPS16Q9H269 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
VPS16Q9H269 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS16Q9H269 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
VPS16Q9H269 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
VPS16Q9H269 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 NTF6A-201ENST00000591175 560 ntBASIC24.93■■□□□ 1.58
VPS16Q9H269 AC019171.1-201ENST00000601251 1056 ntBASIC24.93■■□□□ 1.58
VPS16Q9H269 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.93■■□□□ 1.58
VPS16Q9H269 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.93■■□□□ 1.58
VPS16Q9H269 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS16Q9H269 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS16Q9H269 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS16Q9H269 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS16Q9H269 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.92■■□□□ 1.58
VPS16Q9H269 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS16Q9H269 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
VPS16Q9H269 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS16Q9H269 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 ALDH1A3-203ENST00000557963 1670 ntBASIC24.91■■□□□ 1.58
VPS16Q9H269 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS16Q9H269 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
VPS16Q9H269 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.91■■□□□ 1.58
VPS16Q9H269 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
VPS16Q9H269 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
VPS16Q9H269 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
VPS16Q9H269 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
VPS16Q9H269 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
VPS16Q9H269 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
VPS16Q9H269 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
VPS16Q9H269 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
VPS16Q9H269 AC022616.5-201ENST00000518796 181 ntBASIC24.9■■□□□ 1.58
VPS16Q9H269 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.9■■□□□ 1.58
VPS16Q9H269 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS16Q9H269 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms