Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
FOXC2Q99958 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXC2Q99958 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
FOXC2Q99958 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FOXC2Q99958 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXC2Q99958 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
FOXC2Q99958 AC006455.2-201ENST00000429931 906 ntBASIC19.27■□□□□ 0.68
FOXC2Q99958 NTF6G-201ENST00000591094 616 ntBASIC19.27■□□□□ 0.68
FOXC2Q99958 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.27■□□□□ 0.67
FOXC2Q99958 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXC2Q99958 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXC2Q99958 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXC2Q99958 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXC2Q99958 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.26■□□□□ 0.67
FOXC2Q99958 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXC2Q99958 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.26■□□□□ 0.67
FOXC2Q99958 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.26■□□□□ 0.67
FOXC2Q99958 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FOXC2Q99958 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXC2Q99958 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
FOXC2Q99958 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXC2Q99958 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FOXC2Q99958 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
FOXC2Q99958 AL354811.1-201ENST00000610286 706 ntBASIC19.25■□□□□ 0.67
FOXC2Q99958 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXC2Q99958 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FOXC2Q99958 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXC2Q99958 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
FOXC2Q99958 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXC2Q99958 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXC2Q99958 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXC2Q99958 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXC2Q99958 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXC2Q99958 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXC2Q99958 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXC2Q99958 CCDC92B-201ENST00000575506 885 ntBASIC19.24■□□□□ 0.67
FOXC2Q99958 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXC2Q99958 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXC2Q99958 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXC2Q99958 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXC2Q99958 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXC2Q99958 AC097639.1-201ENST00000565519 1891 ntBASIC19.23■□□□□ 0.67
FOXC2Q99958 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
FOXC2Q99958 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXC2Q99958 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
FOXC2Q99958 MIR572-201ENST00000384983 95 ntBASIC19.22■□□□□ 0.67
FOXC2Q99958 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
FOXC2Q99958 AC012414.1-201ENST00000556676 535 ntBASIC19.22■□□□□ 0.67
FOXC2Q99958 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
FOXC2Q99958 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXC2Q99958 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXC2Q99958 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXC2Q99958 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXC2Q99958 AC131274.2-201ENST00000580697 1507 ntBASIC19.21■□□□□ 0.67
FOXC2Q99958 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXC2Q99958 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXC2Q99958 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXC2Q99958 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FOXC2Q99958 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXC2Q99958 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXC2Q99958 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 IGHV3-19-201ENST00000521488 291 ntBASIC19.2■□□□□ 0.66
FOXC2Q99958 KRT18P14-201ENST00000534205 1250 ntBASIC19.2■□□□□ 0.66
FOXC2Q99958 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXC2Q99958 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXC2Q99958 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXC2Q99958 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXC2Q99958 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXC2Q99958 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXC2Q99958 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXC2Q99958 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXC2Q99958 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FOXC2Q99958 MIR6084-201ENST00000622012 110 ntBASIC19.19■□□□□ 0.66
FOXC2Q99958 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXC2Q99958 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXC2Q99958 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXC2Q99958 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXC2Q99958 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXC2Q99958 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXC2Q99958 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms