Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 IKBKGP1-201ENST00000612193 1073 ntBASIC22.12■■□□□ 1.13
CDC6Q99741 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC6Q99741 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC6Q99741 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDC6Q99741 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC6Q99741 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC6Q99741 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC6Q99741 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.11■■□□□ 1.13
CDC6Q99741 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC6Q99741 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC6Q99741 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.1■■□□□ 1.13
CDC6Q99741 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC6Q99741 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC6Q99741 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.1■■□□□ 1.13
CDC6Q99741 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.1■■□□□ 1.13
CDC6Q99741 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CDC6Q99741 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC6Q99741 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC6Q99741 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC6Q99741 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC6Q99741 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC6Q99741 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.09■■□□□ 1.13
CDC6Q99741 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CDC6Q99741 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC6Q99741 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.08■■□□□ 1.13
CDC6Q99741 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CDC6Q99741 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC6Q99741 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC6Q99741 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC6Q99741 AL358852.1-201ENST00000623174 1268 ntBASIC22.08■■□□□ 1.13
CDC6Q99741 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC6Q99741 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
CDC6Q99741 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC6Q99741 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC6Q99741 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC6Q99741 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC6Q99741 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC6Q99741 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.07■■□□□ 1.12
CDC6Q99741 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CDC6Q99741 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC6Q99741 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CDC6Q99741 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC6Q99741 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC6Q99741 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC6Q99741 AC123595.1-201ENST00000440769 1046 ntBASIC22.06■■□□□ 1.12
CDC6Q99741 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC6Q99741 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC6Q99741 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC6Q99741 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC6Q99741 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC6Q99741 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC6Q99741 TSPY26P-201ENST00000476365 1326 ntBASIC22.06■■□□□ 1.12
CDC6Q99741 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC6Q99741 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC6Q99741 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.05■■□□□ 1.12
CDC6Q99741 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CDC6Q99741 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC6Q99741 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
CDC6Q99741 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC6Q99741 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC6Q99741 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDC6Q99741 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CDC6Q99741 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC6Q99741 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CDC6Q99741 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDC6Q99741 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDC6Q99741 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.04■■□□□ 1.12
CDC6Q99741 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CDC6Q99741 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC6Q99741 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.04■■□□□ 1.12
CDC6Q99741 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC6Q99741 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC6Q99741 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC6Q99741 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC6Q99741 AC027612.3-201ENST00000413684 1047 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L2-201ENST00000561772 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L6-201ENST00000626483 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L1-201ENST00000627662 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L8-201ENST00000629013 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L3-201ENST00000630187 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L7-201ENST00000630678 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 DUX4L5-201ENST00000630834 1275 ntBASIC22.03■■□□□ 1.12
CDC6Q99741 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms