Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 C9orf163-202ENST00000624034 2573 ntBASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 YBX1P4-201ENST00000392794 808 ntBASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB18PQ96TA0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB18PQ96TA0 AC068473.5-201ENST00000616428 2072 ntBASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB18PQ96TA0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 AC004448.1-201ENST00000458332 883 ntBASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PCDHB18PQ96TA0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB18PQ96TA0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHB18PQ96TA0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB18PQ96TA0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB18PQ96TA0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB18PQ96TA0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHB18PQ96TA0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 AL031848.2-201ENST00000607670 837 ntBASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.19■■□□□ 1.46
PCDHB18PQ96TA0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB18PQ96TA0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB18PQ96TA0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 AC137630.3-201ENST00000607245 391 ntBASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB18PQ96TA0 AC092068.2-201ENST00000590491 1708 ntBASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms