Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.8■■□□□ 1.4
NECTIN4Q96NY8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 AC123595.1-201ENST00000440769 1046 ntBASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NECTIN4Q96NY8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AC027612.3-201ENST00000413684 1047 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L2-201ENST00000561772 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L6-201ENST00000626483 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L1-201ENST00000627662 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L8-201ENST00000629013 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L3-201ENST00000630187 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L7-201ENST00000630678 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 DUX4L5-201ENST00000630834 1275 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 AL031602.1-201ENST00000633169 911 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 TSPY26P-201ENST00000476365 1326 ntBASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NECTIN4Q96NY8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NECTIN4Q96NY8 AC092437.1-201ENST00000624794 1048 ntBASIC23.77■■□□□ 1.4
NECTIN4Q96NY8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
NECTIN4Q96NY8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.76■■□□□ 1.39
NECTIN4Q96NY8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 pRNA.6-201ENST00000610482 90 ntBASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 pRNA.5-201ENST00000612139 90 ntBASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 pRNA.11-201ENST00000618423 90 ntBASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 pRNA.13-201ENST00000619112 90 ntBASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NECTIN4Q96NY8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NECTIN4Q96NY8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 MIR6089-201ENST00000616698 64 ntBASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NECTIN4Q96NY8 ID1-201ENST00000376105 1233 ntBASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms