Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 AF106564.1-201ENST00000607058 2553 ntBASIC18.69■□□□□ 0.58
LINC00052Q96N35 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LINC00052Q96N35 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC00052Q96N35 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LINC00052Q96N35 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LINC00052Q96N35 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00052Q96N35 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC00052Q96N35 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00052Q96N35 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00052Q96N35 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00052Q96N35 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00052Q96N35 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00052Q96N35 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00052Q96N35 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00052Q96N35 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.67■□□□□ 0.58
LINC00052Q96N35 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00052Q96N35 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00052Q96N35 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00052Q96N35 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LINC00052Q96N35 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00052Q96N35 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC00052Q96N35 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
LINC00052Q96N35 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.64■□□□□ 0.58
LINC00052Q96N35 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.64■□□□□ 0.58
LINC00052Q96N35 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00052Q96N35 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC00052Q96N35 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00052Q96N35 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00052Q96N35 AC008813.1-201ENST00000536597 885 ntBASIC18.64■□□□□ 0.57
LINC00052Q96N35 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC00052Q96N35 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00052Q96N35 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00052Q96N35 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00052Q96N35 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LINC00052Q96N35 SLC6A10P-202ENST00000431994 2058 ntBASIC18.64■□□□□ 0.57
LINC00052Q96N35 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00052Q96N35 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.63■□□□□ 0.57
LINC00052Q96N35 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LINC00052Q96N35 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00052Q96N35 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LINC00052Q96N35 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00052Q96N35 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00052Q96N35 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00052Q96N35 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00052Q96N35 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms