Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 LINC00526-201ENST00000581067 1875 ntBASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COX4I2Q96KJ9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.89■□□□□ 0.94
COX4I2Q96KJ9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COX4I2Q96KJ9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COX4I2Q96KJ9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 AC139795.1-202ENST00000500444 432 ntBASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 AC103834.1-201ENST00000520383 144 ntBASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COX4I2Q96KJ9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 AC025884.2-201ENST00000553429 711 ntBASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COX4I2Q96KJ9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 SPCS2P3-201ENST00000500401 656 ntBASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.86■□□□□ 0.93
COX4I2Q96KJ9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 RAP2CP1-202ENST00000605179 643 ntBASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.85■□□□□ 0.93
COX4I2Q96KJ9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 AL137060.1-201ENST00000618151 2648 ntBASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 AC093536.1-201ENST00000569153 554 ntBASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 FOXO3B-201ENST00000395675 1928 ntBASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 AL359258.2-201ENST00000564063 1566 ntBASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COX4I2Q96KJ9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 MIR6765-201ENST00000614092 87 ntBASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
COX4I2Q96KJ9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COX4I2Q96KJ9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms